Comparing Adult Hippocampal Neurogenesis Across Species: Translating Time to Predict the Tempo in Humans

Comparison of neurodevelopmental sequences between species whose initial period of brain organization may vary from 100 days to 1,000 days, and whose progress is intrinsically non-linear presents large challenges in normalization. Comparing adult timelines when lifespans stretch from 1 year to 75 years, when underlying cellular mechanisms under scrutiny do not scale similarly, presents challenges to simple detection and comparison. The question of adult hippocampal neurogenesis has generated numerous controversies regarding its simple presence or absence in humans versus rodents, whether it is best described as the tail of a distribution centered on early neural development, or is several distinct processes. In addition, adult neurogenesis may have substantially changed in evolutionary time in different taxonomic groups. Here, we extend and adapt a model of the cross-species transformation of early neurodevelopmental events which presently reaches up to the equivalent of the third human postnatal year for 18 mammalian species (www.translatingtime.net) to address questions relevant to hippocampal neurogenesis, which permit extending the database to adolescence or perhaps to the whole lifespan. We acquired quantitative data delimiting the envelope of hippocampal neurogenesis from cell cycle markers (i.e., Ki67 and DCX) and RNA sequencing data for two primates (macaque and humans) and two rodents (rat and mouse). To improve species coverage in primates, we gathered the same data from marmosets (Callithrix jacchus), but additionally gathered data on a number of developmental milestones to find equivalent developmental time points between marmosets and other species. When all species are so modeled, and represented in a common time frame, the envelopes of hippocampal neurogenesis are essentially superimposable. Early developmental events involving the olfactory and limbic system start and conclude possibly slightly early in primates than rodents, and we find a comparable early conclusion of primate hippocampal neurogenesis (as assessed by the relative number of Ki67 cells) suggesting a plateau to low levels at approximately 2 years of age in humans. Marmosets show equivalent patterns within neurodevelopment, but unlike macaque and humans may have wholesale delay in the initiation of neurodevelopment processes previously observed in some precocial mammals such as the guinea pig and multiple large ungulates

Depolarization metric spaces for biological tissues classification

Classification of tissues is an important problem in biomedicine. An efficient tissue classification protocol allows, for instance, the guided-recognition of structures through treated images or discriminating between healthy and unhealthy regions (e.g., early detection of cancer). In this framework, we study the potential of some polarimetric metrics, the so-called depolarization spaces, for the classification of biological tissues. The analysis is performed using 120 biological ex vivo samples of three different tissues types. Based on these data collection, we provide for the first time a comparison between these depolarization spaces, as well as with most commonly used depolarization metrics, in terms of biological samples discrimination. The results illustrate the way to determine the set of depolarization metrics which optimizes tissue classification efficiencies. In that sense, the results show the interest of the method which is general, and which can be applied to study multiple types of biological samples, including of course human tissues. The latter can be useful for instance, to improve and to boost applications related to optical biopsy.Agència de Gestió d'Ajuts Universitaris i de Recerca, Grant/Award Number: 2017-SGR-001500; Ministerio de Economía y Competitividad, Grant/Award Numbers: Fondos FEDER, RTI2018-097107-B-C3

Dipturus leptocaudus, Thintail Skate

The Thintail Skate (Dipturus leptocaudus) is a medium-sized (to 88 cm total length) skate that occurs in the Southwest Atlantic from Santa Catarina, Brazil to Uruguay (and possibly Argentina). It inhabits the continental shelf and upper slope at depths of 10–550 m. It is captured in commercial deep-water trawl, longline, and gillnet fisheries, which operate throughout its known range. Little information is available regarding the amount of catches due to identification issues. Dipturus spp. were the most abundant elasmobranchs caught in the monkfish (Lophius gastrophysus) deep-water gillnet fishery off southern Brazil, which intensified in the 2000s. These industrial gillnet fisheries often also target skates, and have led to declines in other ecologically similar species such as angel sharks (Squatina spp.). Dipturus spp. were shown to be highly vulnerable to such fisheries in a productivity-susceptibility analysis. There are also deep-water trawlers operating in the area targeting shrimp and squid, which are intense. Overall, due to the presence of intense and inadequately managed trawl fisheries that operate throughout its range, it is suspected that the Thintail Skate has undergone a population reduction of 30–49% over the past three generations (21 years), and it is assessed as Vulnerable A2d.Fil: Pollom, R.. University Fraser Simon; CanadáFil: Charvet, P.. Universidade Federal do Paraná; BrasilFil: Chiaramonte, Gustavo Enrique. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia". Estación Hidrobiológica de Puerto Quequén (sede Quequén); ArgentinaFil: Cuevas, J. M.. Wildlife Conservation Society; Estados UnidosFil: Herman, K.. Georgia Aquarium; Estados UnidosFil: Paesch, L.. Dirección Nacional de Recursos Acuáticos; UruguayFil: Pompert, J.. Georgia Seafoods; Países BajosFil: Rincon, G.. Universidade Federal Do Maranhao.; Brasi

New approach of fragment charge correlations in 129Xe+(nat)Sn central collisions

A previous analysis of the charge (Z) correlations in the $\Delta Z-$ plane for Xe+Sn central collisions at 32 MeV/u has shown an enhancement in the production of equally sized fragments (low $\Delta Z$) which was interpreted as an evidence for spinodal decomposition. However the signal is weak and rises the question of the estimation of the uncorrelated yield. After a critical analysis of its robustness, we propose in this paper a new technique to build the uncorrelated yield in the charge correlation function. The application of this method to Xe+Sn central collision data at 32, 39, 45 and 50 MeV/u does not show any particular enhancement of the correlation function in any $\Delta Z$ bin.Comment: 23 pages, 9 figures, revised version with an added figure and minor changes. To appear in Nuclear Physics

Bathyraja scaphiops, Cuphead Skate

The Cuphead Skate (Bathyraja scaphiops) is a medium-sized (to 117 cm total length) skate that occurs in the Southwest Atlantic from off Rio Grande do Sul, Brazil to Tierra del Fuego, Argentina and the Falkland Islands (Malvinas). It inhabits continental and insular shelves and slopes at depths of 30?925 m. It is targeted or captured as utilized bycatch in demersal trawl fisheries, including the southern Brazil otter trawl fishery, the Patagonian scallop and hake fisheries, and the Falkland Islands (Malvinas) targeted multi-species skate fishery. At the northern extent of its range in southern Brazil, it is captured in the otter trawl fishery which is intense; reductions in the population are suspected there but there are no data. In the Argentina-Uruguay Common Fishing Zone (AUCFZ), this species was captured frequently in commercial trawls between 1984 and 2009. On the shelf edge off Argentina between Buenos Aires and northern Santa Cruz, this species was present in 9% of research trawls in the area trawled by the Patagonian scallop fishery in 2010. In the Falkland Islands (Malvinas), this species made up an average of 3.5% of the catch in the multi-species skate fishery between 1993 and 2013, with no clear trend in catch-per-unit-effort over that time frame. Overall, although this species is subjected to substantial fishing pressure, it has remained common in catches and it may have refuge over rough substrates that are untrawlable. Although fisheries are likely leading to some reduction in population size, the level is not suspected to approach the thresholds for a threatened assessment. Therefore, the Cuphead Skate is assessed as Least Concern.Fil: Pollom, R.. University Fraser Simon; CanadáFil: Charvet, P.. Universidade Federal do Paraná; BrasilFil: Chiaramonte, Gustavo Enrique. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia". Estación Hidrobiológica de Puerto Quequén (sede Quequén); ArgentinaFil: Cuevas, J.M.. Wildlife Conservation Society; Estados UnidosFil: Herman, K.. Georgia Aquarium; Estados UnidosFil: Paesch, L.. Direccion Nacional de Recursos Acuaticos ; UruguayFil: Pompert, J.. No especifíca;Fil: Rincon, G.. Universidade Federal Do Maranhao.; Brasi

HDL and Glut1 inhibition reverse a hypermetabolic state in mouse models of myeloproliferative disorders

A high metabolic rate in myeloproliferative disorders is a common complication of neoplasms, but the underlying mechanisms are incompletely understood. Using three different mouse models of myeloproliferative disorders, including mice with defective cholesterol efflux pathways and two models based on expression of human leukemia disease alleles, we uncovered a mechanism by which proliferating and inflammatory myeloid cells take up and oxidize glucose during the feeding period, contributing to energy dissipation and subsequent loss of adipose mass. In vivo, lentiviral inhibition of Glut1 by shRNA prevented myeloproliferation and adipose tissue loss in mice with defective cholesterol efflux pathway in leukocytes. Thus, Glut1 was necessary to sustain proliferation and potentially divert glucose from fat storage. We also showed that overexpression of the human ApoA-I transgene to raise high-density lipoprotein (HDL) levels decreased Glut1 expression, dampened myeloproliferation, and prevented fat loss. These experiments suggest that inhibition of Glut-1 and HDL cholesterol-raising therapies could provide novel therapeutic approaches to treat the energy imbalance observed in myeloproliferative disorders

Correction: Thioredoxin Glutathione Reductase from Schistosoma mansoni: An Essential Parasite Enzyme and a Key Drug Target

Correction: Thioredoxin Glutathione Reductase from Schistosoma mansoni: An Essential Parasite Enzyme and a Key Drug Targe

Squatina argentina, argentine angelshark

The Argentine Angelshark (Squatina argentina) is a small (to 138 cm total length) demersal shark species that occurs in waters in the Southwest Atlantic from Santa Catarina, Brazil, south to Buenos Aires, Argentina. This species inhabits sandy substrates at depths of 51-320 m. The species has a relatively slow life history, giving birth to 7-11 pups with a biennial or possibly triennial reproductive cycle. The Argentine Angelshark is targeted and/or caught as bycatch in demersal trawl, gillnet, and longline fisheries, and is sold and utilized for human consumption (although angel sharks are protected in Brazil). Angel sharks are notoriously difficult to identify, and catches are typically reported at the generic level and therefore include at least three species that are native to the region (the Argentine Angelshark, the Hidden Angelshark (S. occulta), and the Angular Angelshark (S. guggenheim)). Declines in CPUE during research trawls in southern Brazil indicate that the population declined substantially in the mid-late 1990s. Further research data corroborates this, indicating the equivalent of a reduction of more than 90% over three generation lengths (46.5 years). There is also heavy fishing pressure in Uruguay and Argentina, where the Argentine Angelshark is caught alongside the Hidden Angelshark and the Angular Angelshark. Landings data indicate a reduction of angel sharks in the Argentinean-Uruguayan Common Fishing Zone of over 70% over three generations, and datasets further south in Argentina indicate a reduction of over 90% over a similar timeframe (although these landings likely consist mostly of Angular Angelshark). Due to heavy fishing pressure across its range, reported declines in landings and research surveys, and the species' low productivity, it is inferred that this species has undergone, on balance, a population reduction of at least 80% over the past three generations (46.5 years). Therefore, the Argentine Angelshark is listed as Critically Endangered A2bd. Strict regulations for limits to fisheries catch are needed, as is the identification and protection of critical habitat.Fil: Cuevas, J. M.. Wildlife Conservation Society; Estados UnidosFil: Awruch, Cynthia Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Centro para el Estudio de Sistemas Marinos; ArgentinaFil: Barreto, R.. Instituto Chico Mendes de Conservacao Da Biodiversidade; BrasilFil: Charvet, P.. Universidade Federal do Paraná; BrasilFil: Chiaramonte, Gustavo Enrique. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia". Estación Hidrobiológica de Puerto Quequén (sede Quequén); ArgentinaFil: Faria, V.. Universidade Federal Do Ceara; BrasilFil: Paesch, L.. Dirección Nacional de Recursos Acuáticos; UruguayFil: Rincon, G.. Universidade Federal Do Maranhao.; Brasi

Thioredoxin Glutathione Reductase from Schistosoma mansoni: An Essential Parasite Enzyme and a Key Drug Target

Using both genetic and biochemical approaches, David Williams and colleagues show that the parasite thioredoxin glutathione reductase meets all the major criteria to be a key target for antischistosomal chemotherapy

Squatina occulta, Hidden Angelshark

The Hidden Angelshark (Squatina occulta) is a medium-sized shark (to 160 cm total length) endemic to the Southwest Atlantic inhabiting waters from Rio de Janeiro, Brazil, to Buenos Aires Province, Argentina and likely further south to the northern Patagonia-Argentine region. It is mainly found on the continental shelf at depths of 10-150 m, but has been found at depths to 350 m. The species' low reproductive potential (litter size of 4-10 and a possible three-to-five-year female breeding cycle) together with its susceptibility to capture in both trawl and gillnet gear makes it highly susceptible to population depletion. Angel sharks are heavily fished in southern Brazil and significant reductions have been documented there. In the period from 1988 to 2002, on the continental shelf of southern Brazil, the abundance of Squatina species was reduced by approximately 85%, and benthic trawl fishing continued to intensively exploit this population in more recent years. In the same region, scientific fishing cruises conducted between 1986 to 2001 using bottom trawls revealed that the frequency of occurrence and CPUE (in kg/hour and number of individuals/hour) of this species was reduced by 80% confirming trends observed in commercial fisheries. In Argentina, trawl catches of Squatina underwent a reduction of 58% in the years 1992-1998, showing a continuing negative trend since then. These are the equivalent of a >99% reduction over three generation lengths (46.5 years), however there may be other areas within its range where fishing intensity is not as high. The catch and trade of this species has been banned in Brazil since 2004, but it is still targeted illegally and caught as bycatch and sold in markets. Given the species' relatively low productivity, the presence of intensive fisheries throughout the species' range, and the level of localized reductions reported, the Hidden Angelshark is inferred to have undergone a population reduction of over 80% over three generation lengths (46.5 years) across its range, and is therefore assessed as Critically Endangered A2bd.Fil: Awruch, C. A.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Centro para el Estudio de Sistemas Marinos; ArgentinaFil: Barreto, R.. Instituto Chico Mendes de Conservacao Da Biodiversidade; BrasilFil: Charvet, P.. Universidade Federal do Paraná; BrasilFil: Chiaramonte, Gustavo Enrique. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia". Estación Hidrobiológica de Puerto Quequén (sede Quequén); ArgentinaFil: Cuevas, J. M.. Wildlife Conservation Society; Estados UnidosFil: Faria, V.. Universidade Federal Do Ceara; BrasilFil: Paesch, L.. Dirección Nacional de Recursos Acuáticos; UruguayFil: Rincon, G.. Universidade Federal Do Maranhao.; Brasi